Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882770.1_cds_XP_016438275.1_33955
CDS Infomation

[gene=LOC107764234] [db_xref=GeneID:107764234] [protein=pre-mRNA-processing factor 19-like isoform X2] [protein_id=XP_016438275.1] [location=join(20934..20946,21066..21151,22525..22596,22727..22789,23545..23631,24059..24176,24296..24420,24622..24738,31001..31096,31247..31306,31926..32000,32727..32831,32910..33026,33147..33224,33338..33434,33861..33912,34239..34309,34409..34521)] [gbkey=CDS]
Sequence

ATGAACTGTTCAATTTCCGGTGAGGTACCGGAAGTGCCAGTAGTGTCAATGAAATCTGGA
CTTATTTTTGAGAAGCGTTTAATTGAAAGACACATCTCGGATTATGGTAAATGTCCGGTC
ACTGGAGAGCCACTGACAATGGATGACATTATTCCAGTTAAAACTGGCAAGATAGTGAAG
CCCCGACCTGTGCAGGCCGCCAGTATTCCTGGGATGTTGGGAATGTTTCAGATAGAGTGG
GATGGTCTGATGCTATCCAATTTTGCATTGGAACAACAATTACATACTGCAAGGCAAGAG
CTGAGTCATGCTCTATATCAGCATGATGCTGCATGCCGGGTAATTGCTAGGTTGAAAAAG
GAAAGGGACGAGGCAAGAGCATTGCTTGCACAGGCTGAAAGACAAGTACCCGTGGCAGCA
ACTACAACTGCAACTAATGCTGCTGCTGCGGAGGAGGAGATGGGTCCTGGTGGTAAGAAA
ATTCGCCCAGGAATATCAGGCGATGTTATTAAAGAGCTTCAAGATTGTAATGCTGCTCTT
TCACAACAAAGGAAAAGGCGACAGATTCCTGCAACATTGGCTCCGGTTGATGCTGTTGAA
AGATATACCCAGCTGAATAGTTATCCTCTTCATAAAACAAACAAACCAGGCATTTTGTCT
CTGGATATCCATTATCCTAAGGACATCATTGCTACTGGTGGAGTTGATTCAAATGCTGTG
ATCTTTGATCGGCCTTCAGGGCAGATTGTATCGACACTAAGTGGTCACTCAAAGAGGGTT
ACCAGTATCAGATTTGCTGCTGAGGGTGAACTAGTAGTTACTGGCTCTGCAGATAAGACA
GTACGTGTGTGGCAAAGCTCTGAAAATGGAAATTATGACTGTAAGCATACTTTGAAGGAT
CACAGTGCTGAGGTGCAAGCTGTCACAGTCCATGCAACCAATAAGTACTTTGTGACGGCT
TCTCTTGATGGCACATGGTGTTTTTATGAACTTGCTTCTGGTTTATGCCTTGCTCAGGTA
GCAGATGCTTCAGAATCTGAGGGCTACACATCTGCAGCTTTTCATCCTGATGGTCTGATC
CTTGGAGCAGGAACTTCGGGGGCTCTGGTCAAGATATGGGATGTAAAAAGCCAGGCAAAT
GTTGCAAAATTTGATGGCCATGTTGGAGCAGTAACTGCAATCTCCTTCTCAGAAAATGGT
TATTTCTTAGCAACCGCAGCCCAAGATGGCGTCAAACTTTGGGATTTACGCAAATTGAGA
AACTTCAGAAGCTTTACTCCTTATGATGAAGATACAGCAACTCAATCAGTGGAATTTGAC
CACAGTGGAAGTTATCTTGCATTAGGAGGCTCAGATATAAGAGTTCATCAAGCTGCAAGT
GTCAAGTCCGAATGGAATCTCATCAAAACTTTCCCTGACTTGTCAGGCACAGGTAAAGCA
ACATGTCTGAAATTCGGACCAGATGCGAAATACATAGCTGTTGGATCCATGGATCGGAAT
TTAAGAATATTCGGGCTGCCTGGGGAGGATCAATCAGAGAGTTAG

Peptide Sequence

PEP ID

XP_016438275.1
PEP Infomation

PREDICTED: pre-mRNA-processing factor 19-like isoform X2 [Nicotiana tabacum]
Sequence

MNCSISGEVPEVPVVSMKSGLIFEKRLIERHISDYGKCPVTGEPLTMDDIIPVKTGKIVK
PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARALLAQAERQVPVAATTTATNAAAAEEEMGPGGKKIRPGISGDVIKELQDCNAAL
SQQRKRRQIPATLAPVDAVERYTQLNSYPLHKTNKPGILSLDIHYPKDIIATGGVDSNAV
IFDRPSGQIVSTLSGHSKRVTSIRFAAEGELVVTGSADKTVRVWQSSENGNYDCKHTLKD
HSAEVQAVTVHATNKYFVTASLDGTWCFYELASGLCLAQVADASESEGYTSAAFHPDGLI
LGAGTSGALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYFLATAAQDGVKLWDLRKLR
NFRSFTPYDEDTATQSVEFDHSGSYLALGGSDIRVHQAASVKSEWNLIKTFPDLSGTGKA
TCLKFGPDAKYIAVGSMDRNLRIFGLPGEDQSES

Transcript Sequence

Gene sequence data has not been registered.